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John Toggle [ SAMPLE ]
Species Name
Initial Concentration
jfix (constant, trapezoidal, rectangle)
npulse
Sequence
a0
a1
Ar
1 5.00000000 2 0.10000000 3 10.0000000 4 0.30000000 5 15.0000000 6 0.40000000
ap
RA/Ap
RA
B0
B1
Br
1 5.00000000 2 0.10000000 3 10.0000000 4 0.30000000 5 15.0000000 6 0.40000000
BP
RB/Bp
RB
Reactions
forward
backward
a0 <--> a1
a1 + Ar <--> Ar + a1
Ar + Ar <--> ap + Ar
Ar <-->
a1 + BP <--> a0 + BP
ap <-->
RA + ap <--> RA/Ap
RA/Ap <-->
B0 <--> B1
B1 <--> Br + B1
Br <-->
Br <--> Br + BP
BP <-->
ap + B1 <--> ap + B0
BP + RB <--> RB/Bp
RB/Bp <-->
Inital
Time
Final
Time
Number of
Time Steps
Skip
Integration
Option
Euler
Euler Modified
Fourth Order Runge-Kutta
Adaptive Runge-Kutta
BDF order 2
LSODES
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