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morgan_repressilator [ SAMPLE ]
Species Name
Initial Concentration
jfix (constant, trapezoidal, rectangle)
npulse
Sequence
lacI^0
lacI^1
tetR^0
cl^0
tetR^1
tetR^r
LacI^r
lacI^P
tetR^P
cI^1
cI^r
cI^P
Reactions
forward
backward
lacI^0 <--> lacI^1
LacI^r <-->
LacI^r <--> LacI^r + lacI^P
lacI^P <-->
tetR^0 <--> tetR^1
tetR^r <--> tetR^r + tetR^P
tetR^P <-->
tetR^r <-->
tetR^1 <--> tetR^1 + tetR^r
cI^1 + tetR^P + tetR^P <--> cl^0 + tetR^P + tetR^P
cl^0 <--> cI^1
cI^1 <--> cI^1 + cI^r
cI^r <-->
cI^r <--> cI^r + cI^P
cI^P <-->
lacI^1 <--> lacI^1 + LacI^r
lacI^P + lacI^P + tetR^1 <--> tetR^0 + lacI^P + lacI^P
cI^P + cI^P + lacI^1 <--> lacI^0 + cI^P + cI^P
Inital
Time
Final
Time
Number of
Time Steps
Skip
Integration
Option
Euler
Euler Modified
Fourth Order Runge-Kutta
Adaptive Runge-Kutta
BDF order 2
LSODES
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