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Valeria_Repressilator [ SAMPLE ]
Species Name
Initial Concentration
jfix (constant, trapezoidal, rectangle)
npulse
Sequence
LacI^0
LacI^1
LacI^r
LacI^P
tetR^0
tetR^1
tetR^r
tetR^P
cI^0
cI^1
cI^r
cI^P
Reactions
forward
backward
LacI^1 + cI^P <--> LacI^0 + cI^P
LacI^0 <--> LacI^1
LacI^1 <--> LacI^1 + LacI^r
LacI^r <-->
LacI^r <--> LacI^r + LacI^P
LacI^P <-->
LacI^P + tetR^1 <--> LacI^P + tetR^0
tetR^0 <--> tetR^1
tetR^1 <--> tetR^1 + tetR^r
tetR^r <-->
tetR^r <--> tetR^r + tetR^P
tetR^P <-->
tetR^P + cI^1 <--> tetR^P + cI^0
cI^0 <--> cI^1
cI^1 <--> cI^1 + cI^r
cI^r <-->
cI^r <--> cI^r + cI^P
cI^P <-->
Inital
Time
Final
Time
Number of
Time Steps
Skip
Integration
Option
Euler
Euler Modified
Fourth Order Runge-Kutta
Adaptive Runge-Kutta
BDF order 2
LSODES
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