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Katherine_Repressilator3 [ SAMPLE ]
Species Name
Initial Concentration
jfix (constant, trapezoidal, rectangle)
npulse
Sequence
A0
B0
C0
A1
B1
C1
Ar
Br
Cr
Ap
Bp
Cp
XXX
1 100 2 10 3 100 4 0
Reactions
forward
backward
A1 + Cp + Cp <--> A0 + Cp + Cp
A0 <--> A1
B1 + Ap + Ap <--> B0 + Ap + Ap
B0 <--> B1
C1 + Bp + Bp <--> C0 + Bp + Bp
C0 <--> C1
A1 <--> Ar + A1
B1 <--> Br + B1
C1 <--> Cr + C1
Ar <--> Ar + Ap
Br <--> Br + Bp
Cr <--> Cr + Cp
Ar <-->
Ap <-->
Br <-->
Bp <-->
Cr <-->
Cp <-->
Ap + XXX <-->
Bp + XXX <-->
XXX + Cp <-->
Inital
Time
Final
Time
Number of
Time Steps
Skip
Integration
Option
Euler
Euler Modified
Fourth Order Runge-Kutta
Adaptive Runge-Kutta
BDF order 2
LSODES
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