back to Kin Files
RachelRepressilator [ SAMPLE ]
Species Name
Initial Concentration
jfix (constant, trapezoidal, rectangle)
npulse
Sequence
A0
A1
Ar
Ap
B0
B1
Br
Bp
C0
C1
Cr
Cp
Reactions
forward
backward
A1 + Cp + Cp <--> A0 + Cp + Cp
A0 <--> A1
A1 <--> A1 + Ar
Ar <--> Ar + Ap
Ar <-->
Ap <-->
B1 + Ap + Ap <--> B0 + Ap + Ap
B0 <--> B1
B1 <--> B1 + Br
Br <--> Br + Bp
Br <-->
Bp <-->
C1 + Bp + Bp <--> C0 + Bp + Bp
C0 <--> C1
C1 <--> C1 + Cr
Cr <--> Cr + Cp
Cr <-->
Cp <-->
Inital
Time
Final
Time
Number of
Time Steps
Skip
Integration
Option
Euler
Euler Modified
Fourth Order Runge-Kutta
Adaptive Runge-Kutta
BDF order 2
LSODES
back to Kin Files