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Repressilator_Cole_2 [ SAMPLE ]
Species Name
Initial Concentration
jfix (constant, trapezoidal, rectangle)
npulse
Sequence
lacI0
lacI1
lacIr
lacIp
tetR0
tetR1
tetRp
tetRr
cI0
cI1
cIr
cIp
Reactions
forward
backward
lacI1 <--> lacIr + lacI1
lacIr <--> lacIp + lacIr
tetR0 <--> tetR1
tetR1 <--> tetRr + tetR1
tetRr <--> tetRp + tetRr
lacI0 <--> lacI1
lacI1 + cIp + cIp <--> lacI0
tetR1 + lacIp + lacIp <--> tetR0
cIr <--> cIp + cIr
cI1 <--> cIr + cI1
cI0 <--> cI1
cI1 + tetRp + tetRp <--> cI0
lacIp <-->
lacIr <-->
tetRr <-->
tetRp <-->
cIr <-->
cIp <-->
Inital
Time
Final
Time
Number of
Time Steps
Skip
Integration
Option
Euler
Euler Modified
Fourth Order Runge-Kutta
Adaptive Runge-Kutta
BDF order 2
LSODES
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