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RepressilatorNicole [ SAMPLE ]
Species Name
Initial Concentration
jfix (constant, trapezoidal, rectangle)
npulse
Sequence
lacI0
lacI1
lacIr
lacIp
tetR0
tetR1
tetRr
tetRp
cI0
cI1
cIr
cIp
Reactions
forward
backward
tetR0 <--> tetR1
tetR1 + lacIp + lacIp <--> tetR0
lacI1 + cIp + cIp <--> lacI0
tetR1 <--> tetR1 + tetRr
tetRr <--> tetRr + tetRp
tetRr <-->
tetRp <-->
cI0 <--> cI1
cI1 + tetRp + tetRp <--> cI0
cI1 <--> cI1 + cIr
cIr <--> cIr + cIp
cIr <-->
cIp <-->
lacI0 <--> lacI1
lacI1 <--> lacI1 + lacIr
lacIr <--> lacIr + lacIp
lacIr <-->
lacIp <-->
Inital
Time
Final
Time
Number of
Time Steps
Skip
Integration
Option
Euler
Euler Modified
Fourth Order Runge-Kutta
Adaptive Runge-Kutta
BDF order 2
LSODES
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